Skip to contents

Plotting clonographs

Usage

clonograph(sce, complete_only = FALSE, color_pal = "Reds")

Arguments

sce

the singleCellExperiment Object with the clones, NGT, and architecture.

complete_only

logical to decide whether to plot only complete cells or also low quality cells, default=FALSE

color_pal

brewer.pal pallete selection.

Value

A clonograph figure