CV

Abstract

I have a long-standing interest in investigating cellular behaviors and interactions in complex environments. My PhD studies in the Joyce Lab focused on uncovering the transcriptional regulation and developmental ontogeny of tumor-associated macrophages in brain tumors. I employed computational tools and a number of different genetic lineage tracing and tumor models with complementary analysis on patient-derived specimen. As I studied the functions of myeloid cells in disease, I became increasingly interested in the epigenetic mechanisms regulating their development, and how these processes can be co-opted in leukemia.

In the fall of 2016, I began my postdoctoral work with Dr. Ross Levine, setting out to model clonal evolution and clone-clone interactions in myeloid leukemias. In a recently published co-first author study in Nature, I developed an analytical framework for the analysis of single cell DNA sequencing, resulting in a comprehensive understanding of the genetic architecture of myeloid malignancy. I further developed a series of novel murine genetic tools to evaluate mutation order and oncogene-dependency using multiple, orthogonally inducible recombinases. These studies have revealed distinct patterns disease penetrance and immunophenotype depending upon the cooperating mutations.

Education

YearsDegree
2006-2010B.A. Vanderbilt University
2010-2016Ph.D Cancer Biology, Gerstner Sloan Kettering Graduate Program

Positions and Employment

YearsPosition
2007 - 2010Undergraduate Researcher, Vanderbilt University, Nashville, TN
2009 - 2010Teaching Assistant, Vanderbilt University, Nashville, TN
2010 - 2016Graduate Student, Gerstner Sloan Kettering Cancer Center, New York, NY
2016 -Research Scholar, MSKCC, New York, NY
2016 - 2017Teaching Assistant - Computational Biology, Gerstner Sloan Kettering Graduate Program, New York, NY
2017 - 2019Instructor - Quantitative Biology, Gerstner Sloan Kettering Graduate Program, New York, NY

Publications

Full list of publications can be found here

Fellowships and Honors

Year
2008-2010Summer Undergraduate Research Fellow, Vanderbilt University
2010Undergraduate Research Award, Vanderbilt University
2010-2016Grad into Med Initiative, HHMI
2010cum laude, Vanderbilt University
2011Geoffrey Beene Fellowship, Gerstner Sloan Kettering Graduate Program
2012-2016NRSA F31, National Cancer Institute
2017-2020Sohn Fellow, Damon Runyon Cancer Research Foundation
2020-PresentK99/R00 Pathway to Independece Award, National Cancer Institute

Other Experience and Professional Memberships

Years
2010 - 2016Graduate Student Member, New York Academy of Sciences
2012Attendee, Statistical Analysis of Genomics Data - Cold Spring Harbor Labs

Presentations and Seminars

DatePresentation TitleVenue
June 23rd, 2021Genetic and genomic approaches to modeling clonal evolution in myeloid malignancy.Illumina webinar series.
September 24th, 2021Single cell profiling delineates clonal trajectories in myeloid malignancies.MSKCC Postdoctoral Research Symposium
May 15th 2016Convocation speaker (selected by peers)MSKCC
March 2nd, 2021Modeling subclonal FLT3 mutations in acute myeloid leukemia.NYC leukemia working group

Patents

  1. Compositions and methods for treatment of glioma (PCT/US2016/031431). Daniela F Quail, Johanna A Joyce, Robert L Bowman. This patent covers the dual targeting of CSF-1R inhibition and PI3-Kinase inhibition, or IGF-1R inhibitors, in the treatment of glioblastoma multiforme and other brain malignancies. The rationale is that CSF-1R targeting results in altered tumor associated macrophage function which engenders a dependency in tumor cells upon macrophage-derived IGF1 for survival. November 17th, 2016
  2. Inhibition of colony stimulating factor-1 receptor signaling for the treatment of brain cancer (PCT/US2013/036628). Johanna A Joyce, Robert L Bowman. This patent covers the utility of a gene expression signature in predicting responsiveness to CSF-1R inhibitor therapy in glioblastoma multiforme and other brain malignancies. October 24th, 2013

Research Grants

  1. PI: K99CA248460-01, NIH Pathway to Independence Award (Parent K99/R00). Interrogating oncogene-dependency and mutation order in FLT3 mutant AML. 04/01/20-03/31/22
  2. Co-I: R01CA237213, NCI. Mechanisms of UV-mediated melanoma development. 09/04/202-05/31/2025. ($84,745 of $1,774,506)
  3. PI: DR-SG 22-17, Damon Runyon-Sohn Cancer Research Foundation. Interrogating subclonal architecture and functional contributions of mutation order in AML. 07/01/17-03/31/20
  4. PI: F31 CA167863-01-04. NCI. The Roles of Microglia and Macrophage Populations in the Glioma Microenvironment. 09/18/12–09/17/16

Scientific Leadership and Teaching

Gerstner Sloan Kettering Core Course - Computational BiologyInstructor2017-2019
Weill Cornell Medical College – Quantitative BiologyTeaching assistantFall 2015
MSKCC Career Services – Data Carpentry WorkshopTeaching assistantAugust 2015
MSKCC Summer Undergraduate Research ProgramGraduate MentorFall 2014
Gerstner Sloan Kettering Core CourseTeaching assistantOctober 2014
Vanderbilt University – Introduction to BiologyTeaching assistant2009-2010